Wednesday, July 01, 2009

Weird Words of Science: Azote

I was playing Scrabble online the other day and when a z materialized on my rack near the end of the game was desperate enough to try "azo". Good news, what I thought was chemist's shorthand, the dictionary thinks is a word. "Azo" has been part of my vocabulary since I was very young. My dad's graduate work was on azides - molecules that contain three linked nitrogen atoms (N3) tagged at the end and that are notoriously unstable (a fancy chemistry term for "could explode at any time" - at a dinner for his PhD adviser some 25 years later the number of people around the table lacking fingers was astounding). Azo compounds are molecular relatives of the azides - molecules that have an two linked nitrogens in the middle (R-N=N-R). Some azo compounds are brightly colored and generally they are more stable than azides.

As a rule of thumb, if you see "azo" in a compound's name, it's likely to have nitrogen in it somewhere. Why? French chemist Lavoisier dubbed the fraction of air that cannot support life "azote" from the Greek azotos: without + life. We now know that roughly 80% of the air we breathe is nitrogen gas - hence the connection between azo and nitrogen.

Lavoisier's alternate terms was "mephitic air" -- another Greek import, this time from the name of the goddess who prevented noxious smells from arising from sewers: Mephitis. Ironically, while many nitrogen compounds smell awful (dead fish anyone?), nitrogen gas, Lavoisier's mephitic air, is odorless. That goddess has lent her name to smellier pursuits though - the striped skunk's Latin name is Mephitis mephitis. I can personally attest to the smell.


Photo used under Creative Commons license. Credit to Kevin Bowman.

Tuesday, June 23, 2009

Releasing the Tension

My youngest son, Barnacle Boy, swims like a fish. When he was small, he could stay under water just a second longer than I though he should be able to -- I'd be ready to reach under and haul him to the surface, and then up he would pop. I began to wonder if he had gills.

Nowadays I'm certain he has no gills, though he can still hold his breath for a long time. He's not quite completely adapted to an aquatic life, though. He suffers from water in the ears. And he hates to hear himself sloshing...

The standard remedy for water stuck in the ears is "SwimEar" - an ad for which reads in part:

"Once water enters this tube...surface tension will cause this water to adhere firmly to the walls of the canal, thereby blocking it. Why is this water so difficult to remove? This is due to surface tension effect as well as the fact that it is extremely difficult to break the vacuum that is created behind the trapped water in the ear canal."

Despite the popping sensation you can get when your ears finally clear from water, there is no vacuum behind the water (really, I'm certain). As the ad implies, the trouble is that water is clingy, and therefore has a high surface tension. The high surface tension is what impedes the flow of water out of the ear canal -- think of getting the water out of a thin straw. The ear canal is behaving like a capillary. Reduce the surface tension and the fluid will release.

SwimEar is just a solution of isopropyl alcohol with a dash of glycerin added for comfort. (Ethanol, or ethyl alcohol, is what we drink - but to a chemist, an alcohol is a molecule that has a "tail" of (mostly) carbons and hydrogens topped off by a hydroxyl group: OH. Ethanol is CH3CH2OH, isopropyl alcohol is (CH3)2CHOH.) The isopropyl alcohol lowers the surface tension of the water (so will a bit of soapy water for that matter).

Thursday, June 11, 2009

Sweet leads


Sugar of Lead Poison Bottle
Originally uploaded by john4kc


Horror of horrors - the Romans used lead to sweeten their fruit. No wonder Rome fell! Except that I was willing to read a 1883 paper (in German with healthy helpings of Greek and Latin) to discover that it may be lead and it may be sweet, but the lead doesn't lead it to be sweet.

In a time when mercury was regularly used as a remedy for maladies as serious as syphilis and as commonplaces as constipation, it doesn’t surprise me that lead compounds were in the pharmacopeia. (In all fairness, some modern antibiotics and most chemotherapy agents are at least as toxic as these less old remedies; they just have a better risk-benefit ratio.) Sugar of lead, or as it’s called in the 19th century medical literature, saccharum saturni, is lead acetate: Pb(CH3COOH)2. It was once prescribed for intestinal troubles, an odd choice, since one symptom of acute lead poisoning is an upset stomach. Lead poisoning is also known as painter's colic.

Sugar of lead really is sweet, roughly as sweet per spoonful as sugar. In the 18th and 19th century, lead shot was often dropped into bottles of port, purportedly to make it sweeter - though the more likely effect is anti-bacterial. Why? Lead does dissolve well in alcohol and juices (crystal decanters to store your port are a bad idea) - but I can't find anything that suggests solutions of lead ions are sweet.

The Romans were reputed to use lead acetate as a sweetener. They produced a syrup called sapa by boiling down mildly fermented grape juice in kettles made from lead alloys. (The hydrates of lead acetate are far less soluble in alcohol solutions - you are more likely to get a suspension of crystals in the syrup.) I am suggesting that it’s unlikely that the syrup was sweet because of the lead acetate it certainly contained. An 1883 analysis of sapa produced according to recipes dating from the classical Roman period, in kettles of similar metallic content to those found at Pompeii and other sites, suggested that the lead content of sapa was roughly 850 mg per liter. The equivalent amount of table sugar would be roughly a teaspoon - hardly enough to taste sweet in a liter of liquid. On the other hand, the sugars (glucose and fructose) in the concentrated grape must are the equivalent of 1 cup of table sugar per liter and would certainly swamp any sweetness coming from the lead acetate. It's still not all that sweet. To get a sense of how sweet this is, simple syrup, which has similar culinary uses to sapa, has about 4 cups of sugar in a liter.

I still wouldn't use sapa to poach my pears, but I think it unlikely that the sweet taste of sapa has much to do with lead.


Photo is c. 2009 John4kc. Used with permission.

Friday, June 05, 2009

Sweet Stones

I was wandering the Cape Anne historical museum this winter and noticed in a 19th century ship's medical kit a vial labeled "sugar of lead." This is lead acetate, which tastes sweet -- and is reputed to have been used as a sweetener is days past. Other metal salts are sweet as well - yttrium salts and beryllium salts can both taste sweet.

Beryllium was first identified in 1798 by chemist Louis Vauquelin as an oxide in beryl and emeralds (emeralds are beryls with a bit of chromium added!). Since the chloride salt of the new element tasted sweet, the editors of the journal which published Vauquelin's findings suggested he call the oxide (or earth) glucina from the Greek, glyks (γλυκυς) for sweet. The elemental symbol used was Gl.

Beryllium was suggested as alternative once other sweet metal salts were found, for the gemstones in which the element was first identified. It took until 1949 for this to become the official IUPAC name of the element with four protons.

Beryls were used to make "reading stones," magnifying glasses, then eventually ground into lenses for eyeglasses.

Monday, June 01, 2009

Anti-Archimedes

The recipe for pulled pork called for 1/2 cup of brown sugar to be dissolved into 1 1/2 cups of apple cider vinegar. What I had in the cabinet was solid as a rock - there was no way I was packing this into a measuring cup. (Yes, I know I could have done this in the microwave...) My scale came to the rescue. I hacked off chunks until I had the correct mass of brown sugar (110 grams more or less). I dumped the three large hunks into the vinegar in a 2 cup glass measure, and noted that the total volume was just about 2 cups. Nice job.

Then I stirred it to dissolve the sugar. And watched the volume decrease to just over 1 1/2 cups of solution! Have I just proved Archimedes wrong? The volume of sugar at first seemed to have displaced the equivalent volume of liquid, but then seemed to vanish...well not exactly into thin air, but vanish nonetheless. As my 15-year old might say, "What's up with that?"

Yes, Archimedes was correct, but his theory did not address substances that dissolve in the liquid. This is a good demonstration of how much "empty "space is in a liquid. The sugar molecules (and other things in brown sugar, which is not terribly pure as chemicals go) insert themselves between water molecules, without needing to push the water molecules further apart. To a good first approximation the volume of a solution made from a solvent and soluble solid is the volume of the solvent used, not the sum of the two volumes.

Try it...it's fun to watch, and it still intrigues me to think about the amount of unused space there is in a liquid that seems so substantial at the macroscopic level!


The pulled pork was a keeper...though the kids found the BBQ sauce too spicy for their taste. Try it on challah rolls!

Tuesday, May 26, 2009

Cold as Ice

This article in the Atlantic monthly caught my eye, if only because it included an experiment and less because of my refined palate. Wayne Curtis is writing about the unsung hero or villian of mixed drinks: ice.
"I went into the kitchen with another bartender, Stephen Cole, who hunted up a scale and thermometer. He placed the two kinds of ice into separate cups filled with water. We let them sit for 10 minutes. The cheater-ice water proved to be colder (34 degrees compared with 40 degrees), but the ice had lost a full quarter of its weight, compared with just a 14 percent loss in the chunk ice. A cheater-ice cocktail is thus chillier (numbing the taste buds) and more watery (making it flat)."
He describes a bar which stocks eight different types of ice - though the classification system is not quite what a physical chemist might use - or even Kurt Vonnegut. I suspect, however, a serious flaw in the experiment, and therefore in the conclusions drawn about the effect of ice type on a drink.

Take a mixture of ice and water that has been thermally isolated (put in a thermos!) and allow it to come to thermal equilibrium (let it sit until the temperature doesn't change any longer). When the contents of the thermos reach equilibrium, if there are both ice and water present, the temperature is 32 degrees (Fahrenheit). It does not matter how cold the ice was to start, how much water is present, how warm or cold the water was - it will be 32 degrees. Not 40. Not 34.

Also known to those who know how to read a phase diagram, ice at normal pressures will not start to melt until it reaches 32 degrees, and its temperature will not rise above 32 degrees until it has all melted. Curtis' experiment isn't quite as sophisticated as the thermos one I've sketched out, but assuming that the rate of heat loss to the room was small (air - or any gas - isn't a very good thermal conductor, so over the short term this is not a bad assumption), and that the ice and water used were pure, and that a very large amount of water was used relative to the ice - I find it untenable that the "cheater-ice" cocktail is different in temperature than the one made with less porous ice. More watery, yes, colder, no.



Photography by Sue Stafford. Used under Creative Commons license.

Monday, May 11, 2009

Weird Words of Science: Hypsometer


Every time I write an exam, I think about this story, where a physics professor asks on an exam how to measure the height of a building using a barometer. A student answered that he would tie a string to the barometer, lower it down, then measure the length of the string. Given no credit, he protests, and the professor offers him a second chance to provide an answer that is both correct and demonstrates some knowledge of physics taught in the course. The student goes on to give several answers (in some versions the student is averred to be Niels Bohr - though the origin of the story is apparently in a textbook on the teaching of math and science by Alexander Calandra, and unrelated to Bohr) all demonstrating a knowledge of physics, and none the one he seems to know the professor is fishing for (which has to do with the - probably unmeasurably small - pressure differential between the ground and the top of the building).

Here is a chemistry exam question I sometimes ask - how would you measure the height of a mountain with a thermometer? This is a well-known technique,not a trick question, the apparatus is called a hypsometer, from the Greek for "height-measure". The underlying science is that the boiling point of a liquid changes in a known way with altitude. Hypsometers were used before portable aneroid barometers became widely available, and were used in high altitude balloon measurements of pressure as late as the 1960s.

Bonus question: Is it easier to drink a liquid using a straw at the top of Mt. Everest or on the beach in Florida? (Disregard temperature differences and explain your answer for full credit!)

Friday, May 01, 2009

Nano-meter

The Nano Song from nanomonster on Vimeo.


This song certainly has rhythm as well as meter...and does give you a sense of what "nano" means. My non-musical attempt of a couple of years ago is not so jazzy!

Friday, April 24, 2009

Table Manners in Nature Chemistry


The second issue of Nature Chemistry appeared online today, with my musings about the shapes the periodic table can take, and why I think chemists like to keep their elements in boxes.

"Chemists have created hundreds of variations in search of the perfect periodic table. The periodic table has been mapped onto spirals, circles, triangles and elephants. The first such “alternative” periodic table, based on a sprial, was proposed by Gustavus Hinrichs of the University of Iowa in 1867, two years before Mendeleev published the forerunner to the current blocked tabular form. Still, open 50 random introductory chemistry texts and it is a fair bet that all 50 of them have IUPAC’s standard periodic table inside, or its generic sister. Chemists are stuck in the box." Read the rest of the column here (requires a subscription...).
Or if my Table Manners are not to your taste, this article in the same issue on syntheses of Moebius molecules might be.

Friday, April 10, 2009

All that glitters...may be tin


While medieval alchemists were searching for the secrets of turning base metals, such as lead and tin, into gold, medieval artists had already figured out how to do this. Gold was often applied to manuscripts in medieval Europe and the Middle East to “illuminate” them, an illuminated page would have the functional equivalent of little mirrors scattered across it, making the most of dim interior lighting. In addition to being reflective, gold does not corrode or oxidize, so gold will not discolor with time. There is a fine collection of medieval illuminated manuscripts at a library near me, and as you turn the pages of Book of Hours that is half a millenia old (wearing gloves, of course), the golden decorations wink at you as brightly as the day they were applied.

Gold is expensive, and hard to handle, particularly in the thin sheets necessitated by the cost. One alternative is to use a tin base, then brush on a saffron oil glaze. Polish it up and you might not notice. The glaze blocks out the oxygen and moisture in the air, preventing many of the chemical reactions which can cause the metal to discolor. The resulting preparation is called auripetrum - Peter’s gold. Peter had a good idea - whoever he was.

Does anyone know more about the source of this name? I'd love to know.